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MaSC: Mappability-Sensitive Cross-Correlation for Estimating Fragment Length

This page contains software accompanying the paper "MaSC: Mappability-Sensitive Cross-Correlation to Estimate Fragment Length for Short Read Sequencing Data", by Ramachandran, Palidwor, Porter and Perkins (2012).

The code is below in the single Perl program MaSC.pl. Usage instructions can be found in the README.txt file.

AttachmentSize
MaSC.pl.txt13.59 KB
README.TXT3.3 KB
MaSC_testdata.zip5.66 MB