Gareth Palidwor, Bioinformatician/Research Assistant
Christopher J. Porter, Bioinformatician/Research Assistant
Praveen Guttula, Postdoc, working on muscle regeneration
Aseel Awdeh, PhD student, working on chip-seq data analysis.
Justin Chitpin, PhD student, working on network lipidomics.
Aarthie Senathirajah, PhD student, working on real-time mass spectrometry.
Renad Al-Ghazawi, MSc student, working on cell population dynamics in muscle regeneration
Alumni (partial list)
Xun Xun Shi, MSc graduated 2021, worked on optimizing DMS machine parameters to separate lipid isomers
Soroush Fard, MSc graduated 2022, worked on using spatial information to improve identification in mass spectrometry imaging
Emily Dunnion, Undergraduate student work on muscle regeneration dynamical modeling, summer 2020
Mirana Rambelo, Undergraduate student worked on prediction from breast tumor histology, summer 2020
Lyna Abrougui, Undergraduate student worked on prediction from breast tumor histology, summer 2020
Maliha Mamun, Undergraduate student worked on gene expression prediction in spatial transcriptomics, summer 2020
Cole DiIanni, Undergraduate student worked on gene expression prediction in spatial transcriptomics, summer 2020
Carson Fischl, Undergraduate student worked on gene fusion software, summer 2020
Joel Howard, Undergraduate Honors student, worked on simulation of RNA-seq fusion data.
Ali Karimnezhad, Postdoc, worked on variant detection in lung cancer biopsies.
Basma Abdelkarim, MSc student, worked on superenhancer dynamics.
Muhammad Bawany, Undergraduate Honors student, worked on ceRNA bioinformatics.
Ahmad Sheikh, Undergraduate Honors student, worked on ceRNA bioinformatics.
Pritish Kalra, Undergraduate Honors student, worked on ceRNA bioinformatics.
Julie Fiala, MSc student, worked on computation for lipidomics.
Sam Wang, MSc student, worked on covariate-sensitive biomarker discovery.
Daniel Sanchez Taltavull, Postdoc 2015 to 2017, worked on systems biology of erythropoiesis. Last seen: Postdoc in Switzerland.
Parameswaran Ramachandran, Postdoc 2010 to 2016, worked on digital signal processing and probabilistic modeling approaches to ChIP-Seq data analysis. Last seen: Scientist in the Mak Lab in the University of Toronto.
Alex Griffith, MSc 2016, worked on ChIP-seq analyses of erythropoiesis.
Yuri Grinberg, Postdoc 2014 to 2015, worked on computational methods for stochastic processes. Last seen: Research Officer at National Research Council Canada.
Sharmin Nilufar, Postdoc 2012 to 2015, worked on image processing and machine learning for microscopy. Last seen: As a professional research evaluator, working for Canada Revenue Agency.
Jeremie Lefebvre, Postdoc 2010 to 2012, worked on neural stochasticity and inference for jump Markov processes. Last seen: Professor at University of Toronto.
Liu Yang, Postdoc 2009 to 2010, worked on regulation and dynamics of the galactose network of yeast. Last seen: Working as an Engineer at Ecobee Inc.
Aseel Awdeh, MSc 2015, worked on the theory of dynamical epistasis analysis. Last seen: Continuing on to do her PhD in the lab.
Mohamed Ghadie, MSc 2015, worked on methods for analyzing high-throughput data in clinical and stem cell applications. Last seen: Doing a PhD at McGill University.
Polaris Jhandi, MSc 2014, worked on Bayesian analysis of high-throughput sequencing data.
Pavel Levin, MSc 2012 in Systems Science, worked on inference for jump Markov processes. Last seen: Working as an analyst at the Jewish General Hospital in Montreal.
Kyle Li, MSc 2011 in Computer Science, worked on "Pooled Designs for Drug Screening". Last seen: Working as a financial analyst at Morgan Stanley.
George Summer, MSc 2010, "Functional Data Analysis Approaches to Network Inference." Last seen: Bioinformatician/Researcher at the School of Cardiovascular Disease (CARIM) of the University of Maastricht, The Netherlands.
Adi Ophir, MSc 2008, "Quantization, mutual information, and causation." Last seen: Software Engineer at Microsoft.
Lee Zamparo, MSc 2008, "Estimating protein copy number form gene expression images.” Last seen: PhD student at University of Toronto.
Faiyaz Zamal, MSc 2008, “Relating expression-based and sequence-based estimates of regulation in the gap gene system of Drosophila melanogaster.” Last seen: PhD student at McGill University.